BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D12SP1|AL428385
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1741 0.0
>3x_Contig1555
Length = 10828
Score = 1741 bits (878), Expect = 0.0
Identities = 901/908 (99%), Gaps = 1/908 (0%)
Strand = Plus / Plus
Query: 1 gatcatgtgacttatgtaattgttgcgacactantn-atgtaggaaaccggtgaacaacg 59
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct: 3278 gatcatgtgacttatgtaattgttgcgaagcaaccatatgtaggaaaccggtgaacaacg 3337
Query: 60 tctatgcaatacggcatgattgagaccattctggacgaaagttacttcacatttatcatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3338 tctatgcaatacggcatgattgagaccattctggacgaaagttacttcacatttatcatg 3397
Query: 120 taacatgtcttggaagtgctaatattgcttgttatgttttttttgctccatttcctatgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3398 taacatgtcttggaagtgctaatattgcttgttatgttttttttgctccatttcctatgt 3457
Query: 180 ctctttgctaagttcccatggccagacatcgatttttttaagaaattgtttctagaactc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3458 ctctttgctaagttcccatggccagacatcgatttttttaagaaattgtttctagaactc 3517
Query: 240 aaatcacatttcaattatatatatttgggactttcacggcgaacaagtttctcagatcaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3518 aaatcacatttcaattatatatatttgggactttcacggcgaacaagtttctcagatcaa 3577
Query: 300 gaaggtataaaagaccgtaaagacctgtggccagtattgaactacgtggcatagaaagtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3578 gaaggtataaaagaccgtaaagacctgtggccagtattgaactacgtggcatagaaagtg 3637
Query: 360 tttcttcatactactacaacataacggtaactgacgagtagtaagcgtgtgtgtggcatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3638 tttcttcatactactacaacataacggtaactgacgagtagtaagcgtgtgtgtggcatt 3697
Query: 420 atcattgaatcatttagggtccagagattcaaatcagcatttgaaaaataaacaatatac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3698 atcattgaatcatttagggtccagagattcaaatcagcatttgaaaaataaacaatatac 3757
Query: 480 atagaatgagactactggtattactgctgttgtacgtctgtaaagttctagctgatgttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3758 atagaatgagactactggtattactgctgttgtacgtctgtaaagttctagctgatgttt 3817
Query: 540 ctgtcacggttccaaaaccaggttcttcttacgctgcttctggtggtgaagtcgaaattg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3818 ctgtcacggttccaaaaccaggttcttcttacgctgcttctggtggtgaagtcgaaattg 3877
Query: 600 aaatccaatggactgacgacgagacgaccccactgttagatgagatcatcgagtacaaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3878 aaatccaatggactgacgacgagacgaccccactgttagatgagatcatcgagtacaaat 3937
Query: 660 tcgtcttatgtactggttcggattctaatatcgtacctgttgacactttgggtccattca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3938 tcgtcttatgtactggttcggattctaatatcgtacctgttgacactttgggtccattca 3997
Query: 720 agccttccgaggtgagtgattacaagtaccaagccagtttcccagccaccacggccccag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3998 agccttccgaggtgagtgattacaagtaccaagccagtttcccagccaccacggccccag 4057
Query: 780 acgggacatatttcattcagatctacgccgcgtataaggaaggatacacgattcattaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4058 acgggacatatttcattcagatctacgccgcgtataaggaaggatacacgattcattaca 4117
Query: 840 gtggtcgtatgaaattgtcaggtatggacggtaccttgagtgtcagtgcagaatctgtga 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4118 gtggtcgtatgaaattgtcaggtatggacggtaccttgagtgtcagtgcagaatctgtga 4177
Query: 900 ctgacact 907
||||||||
Sbjct: 4178 ctgacact 4185
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6289
Number of Sequences: 1807
Number of extensions: 6289
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)